Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920299.1_cds_XP_016469459.1_62001
CDS Infomation

[gene=LOC107791833] [db_xref=GeneID:107791833] [protein=protein TRANSPORT INHIBITOR RESPONSE 1-like] [protein_id=XP_016469459.1] [location=complement(join(3496..4293,4934..5426,7037..7491))] [gbkey=CDS]
Sequence

ATGGCGTACTCATTCCCGGAAGAAGTTTTAGAACACGTGTTCTCCTTCCTCAGCTCCGAC
GAAGACCGCAACTCCGTATCCTTAGTCTGCAAATCATGGTACGAGATCGAACGCTGGTGT
CGGAGGAGAATCTTCGTCGGAAACTGCTACGCCGTGAGCCCTAGCATTATGATCCGACGG
TTCCCAGAAGTCAGATCTGTAGAGTTTAAAGGAAAGCCTCATTTTGCTGACTTCAATCTG
GTCCCTGAAGGTTGGGGTGCTTATGTGCACCCTTGGATTGTGGCTATGTCTAGGTCTTAC
CCTTGGCTCGAGGAAATTAGGCTTAAGCGTATGGTAATTACGGATGAGTCCTTGGAGTTG
ATTTCTAAATCGTTTAAGAACTTCAAGGTGCTGGTTTTGTCTTCTTGTGATGGTTTTACT
ACTGATGGTCTTGCTTCTATTGCCGCTAATTGCAGGAATATTAGAGAACTGGACTTGGGA
GAGAGTGAAGTGGAGGACCTTAGCGGACATTGGCTTAGCCATTTTCCTGATAGCTGCACG
TCACTTGTTTCACTTAACATTGCCTGTTTGGCTTCTGAGATCAGTTTCTTAGCTTTGGAG
CGTCTGGTTTCCCGCTCTCCTAATTTGAGGACTCTTCGGATAAATCGTGCTTTGCCCCTT
GAGAAGCTTCCGAACCTGCTTCGTCGGGCTTCCCAGTTGTTCGAATTTGGTACAGGTGCC
TACTCTGCTGAAGTACGGTCTGATGTCTTCTCAAACCTGACTGAAGCTTTTTCATGCTGC
AAGCAACTTAAAGGCTTGTCTGGGTTTTGGGACATTGTTCCGGCTTACCTTCCAGCTATA
TATCCAGTTTGCTCCAGACTCACCTCTTTGAATTTGAGCTATGCTACCTGTCAAAACCCC
GACCTTGGCAAGCTCATAAGTCAGTGTCACAATTTGCAGCGGTTGTGGGTCCTAGACTAC
ATTGAAGATACTGGTCTTGAGGAACTTGCTGCCAATTGTAAGGACCTTCAAGAGCTGAGG
GTGTTTCCTTCTGATCCTTTTGCCCCTGAACCAAATGCAACCTTGACAGAGCAAGGCCTT
GTAGCTGTCTCAGATGGCTGCCCAAAGCTCCAGTCTGTTTTATACTTCTGCCGCCAAATG
ACAAATGCAGCATTAGTTACTATTGCTAGGAATCGTCCTAACATGATTCGTTTTCGCTTG
TGTATTATTGAGCCTCGATGTCCAGATTACTTAACTCTTGGGCCGCTTGATGCTGGTTTT
GGGGCCATTGTGGAGAACTGTAAAGAATTGCGGCGACTCTCACTTTCTGGCCTCCTTACT
GATCGTGTCTTTGAGTACATAGGGACCCATGCTAAAAAGTTAGAGATGCTTTCCATAGCT
TTTGCTGGGGACAGCGATTTGGGACTCCACCATGTGCTCTCTGGCTGTGAAAGCCTCCGG
AAGCTGGAGATCAGAGATTGTCCCTTTGGAGACAAGGCTCTCTTGGCCAATGCTGCAAAG
CTTGAGACAATGCGATCCCTTTGGATGTCTTCTTGTTCAGTAAGTTTTGGAGCATGTAAG
CTGCTAGCTCAGAAGATTCCTAGGCTTAATGTTGAAGTCATAGATGAGAGGGGTCCTCCA
GATACAAGGCCAGAAAGCTGCCCTGTAGAAAAACTTTATATATATCGATCAGTGGCTGGA
CCGAGGTTTGACAAGCCTGGTTTTGTTTGGACAATGGATGAAGAAGCAGCAGTGAGGTTG
TCTTGA

Peptide Sequence

PEP ID

XP_016469459.1
PEP Infomation

PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Nicotiana tabacum]
Sequence

MAYSFPEEVLEHVFSFLSSDEDRNSVSLVCKSWYEIERWCRRRIFVGNCYAVSPSIMIRR
FPEVRSVEFKGKPHFADFNLVPEGWGAYVHPWIVAMSRSYPWLEEIRLKRMVITDESLEL
ISKSFKNFKVLVLSSCDGFTTDGLASIAANCRNIRELDLGESEVEDLSGHWLSHFPDSCT
SLVSLNIACLASEISFLALERLVSRSPNLRTLRINRALPLEKLPNLLRRASQLFEFGTGA
YSAEVRSDVFSNLTEAFSCCKQLKGLSGFWDIVPAYLPAIYPVCSRLTSLNLSYATCQNP
DLGKLISQCHNLQRLWVLDYIEDTGLEELAANCKDLQELRVFPSDPFAPEPNATLTEQGL
VAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMIRFRLCIIEPRCPDYLTLGPLDAGF
GAIVENCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKIPRLNVEVIDERGPP
DTRPESCPVEKLYIYRSVAGPRFDKPGFVWTMDEEAAVRLS

Transcript Sequence

Gene sequence data has not been registered.